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LIST OF PUBLICATIONS

2024

  • Divya Singh; Tal Robin; Michael Urbakh; Shlomi Reuveni (2024). High-order Michaelis-Menten equations allow inference of hidden kinetic parameters in enzyme catalysis. bioRxiv 2024.06.12.598609.

  • Ofek Lauber Bonomo; Itamar Shitrit; Shlomi Reuveni (2024). Sokoban percolation on the Bethe lattice. arXiv:2405.03072.

  • Ofek Lauber Bonomo; Uri Yechiali; Shlomi Reuveni (2024). Queues with service resetting. arXiv:2311.07770.

  • Yuval Scher; Aanjaneya Kumar; M. S. Santhanam; Shlomi Reuveni (2024). Continuous gated first-passage processes. arXiv:2211.09164.

  • Amy Altshuler; Ofek Lauber Bonomo; Nicole Gorohovsky; Shany Marchini; Eran Rosen; Ofir Tal-Friedman; Shlomi Reuveni; Yael Roichman (2024). Environmental memory facilitates search with home returns. Phys. Rev. Research 6, 023255.

  • Yuval Scher; Shlomi Reuveni; Denis S. Grebenkov (2024). Escape from textured adsorbing surfaces. J. Chem. Phys. 160, 184105.

  • Ofir Blumer; Shlomi Reuveni; Barak Hirshberg (2024). Short-time infrequent Metadynamics for improved kinetics inference. J. Chem. Theory Comput. 20, 9, 3484.

  • Omri Shelef, Tal Kopp, Rozan Tannous, Moriah Jospe-Kaufman, Maxence Arutkin, Shlomi Reuveni, Doron Shabat, and Micha Fridman (2024). Enzymatic activity profiling using an ultra-sensitive array of chemiluminescent probes for bacterial classification and characterization. J. Am. Chem. Soc. 146, 8, 5263.

  • Maxence Arutkin; Shlomi Reuveni (2024). Doubly stochastic continuous time random walk. Phys. Rev. Research 6, L012033.

  • Anupam Kundu; Shlomi Reuveni (2024). Preface: stochastic resetting—theory and applications.  J. Phys. A. 57, 060301.

  • Ofir Blumer; Shlomi Reuveni; Barak Hirshberg (2024). Combining stochastic resetting with Metadynamics to speed-up molecular dynamics simulations. Nat. Commun., 15, 240. [Behind the Paper] [Yet Coverage           ]

2023

2022

2021

2020

2019

  • Arnab Pal; Łukasz Kuśmierz; Shlomi Reuveni (2019). Invariants of motion with stochastic resetting and space-time coupled returns. New J. Phys. 21, 113024.

  • Arnab Pal; Łukasz Kuśmierz; Shlomi Reuveni (2019). Time-dependent density of diffusion with stochastic resetting is invariant to return speed. Phys. Rev. E 100, 040101(R).

  • Ofek Lauber Bonomo; Shlomi Reuveni (2019). Occupancy correlations in the asymmetric simple inclusion process. Phys. Rev. E 100, 042109.

  • Elizabeth A. Libby; Shlomi Reuveni; Jonathan Dworkin (2019). Multisite phosphorylation drives phenotypic variation in (p)ppGpp synthetase-dependent antibiotic tolerance. Nat. Commun., 10, 5133.

  • Iddo Eliazar; Ralf Metzler; Shlomi Reuveni (2019). Gumbel central limit theorem for max-min and min-maxPhys. Rev. E 100, 020104(R). 

  • Iddo Eliazar; Ralf Metzler; Shlomi Reuveni (2019). Poisson-process limit-laws yield Gumbel max-min and min-max. Phys. Rev. E 100, 022129. 

  • Ella Borberg; Marina Zverzhinetsky; Adva Krivitsky; Alon Kosloff; Omri Heifler; Gal Degabli;  Hagit Peretz Soroka; Ronit Satchi-Fainaro; Larisa Burstein; Shiomi Reuveni; Haim Diamant;  Vadim Krivitsky; Fernando Patolsky (2019). Light-controlled selective collection-and-release of biomolecules by an on-chip nanostructured device. Nano Lett. 19, 9, 5868.

  • Arnab Pal; Rakesh Chatterjee; Shlomi Reuveni; Anupam Kundu (2019). Local time of diffusion with stochastic resetting.  J. Phys. A. 52, 264002.

  • Somrita Ray; Debasish Mondal; Shlomi Reuveni (2019). Péclet number governs transition to acceleratory restart in drift-diffusion. J. Phys. A. 52, 255002.

  • Arnab Pal; Iddo Eliazar; Shlomi Reuveni (2019). First passage under restart with branching. Phys. Rev. Lett. 122, 020602.

2018

  • Tal Robin; Shlomi Reuveni; Michael Urbakh (2018). Single-molecule theory of enzymatic inhibition. Nat. Commun. 9(1), 779.

2017

2016

2015

  • Tal Robin; Shlomi Reuveni; Michael Urbakh (2015). Michaelis-Menten reaction scheme as a unified approach towards the optimal restart problem. Phys. Rev. E 92, 060101(R).

2014

2012

  • Shlomi Reuveni; Iddo Eliazar; Uri Yechiali (2012). Limit laws for the asymmetric inclusion process. Phys. Rev. E 86, 061133.

  • Shlomi Reuveni; Iddo Eliazar; Uri Yechiali (2012). Asymmetric inclusion process as a showcase of complexity. Phys. Rev. Lett. 109, 020603.

  • Shlomi Reuveni; Joseph Klafter; Rony Granek (2012). Dynamic structure factor of vibrating fractals: proteins as a case study. Phys. Rev. E 85, 011906.

  • Shlomi Reuveni; Joseph Klafter; Rony Granek (2012). Dynamic structure factor of vibrating fractals. Phys. Rev. Lett. 108, 068101.

 

2011

  • Shlomi Reuveni; Iddo Eliazar; Uri Yechiali (2011). Asymmetric inclusion process, Phys. Rev. E 84, 041101.

  • Shlomi Reuveni; Isaac Meilijson; Martin Kupiec; Eytan Ruppin; Tamir Tuller (2011). Genome-scale analysis of translation elongation with a ribosome flow model. PLOS Comput. Biol. 7(9).

2010

  • Shlomi Reuveni; Rony Granek; Joseph Klafter (2010). General mapping between random walks and thermal vibrations in elastic networks: fractal networks as a case study.  Phys. Rev. E 82, 041132.

  • Shlomi Reuveni; Rony Granek; Joseph Klafter (2010). Anomalies in the vibrational dynamics of proteins are a consequence of fractal like structure. Proc. Natl. Acad. Sci. 107 (31), 13696.

  • Shlomi Reuveni; Rony Granek; Joseph Klafter (2010). Vibrational shortcut to the mean-first-passage-time problem. Phys. Rev. E 81, 040103(R).

2009

  • Marina de Leeuw; Shlomi Reuveni; Joseph Klafter; Rony Granek (2009). Coexistence of flexibility and stability of proteins: an equation of state. PLOS ONE 4(10).

2008

DISSERTATIONS

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